STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RXU9_PETMAUncharacterized protein. (347 aa)    
Predicted Functional Partners:
S4RM36_PETMA
Uncharacterized protein.
   
 0.997
S4R9L3_PETMA
Ion_trans domain-containing protein.
 
 
0.953
S4R5Y6_PETMA
Uncharacterized protein.
 
     0.947
S4RIL4_PETMA
Ion_trans domain-containing protein.
 
     0.941
S4RJA1_PETMA
Uncharacterized protein.
 
 
   0.916
S4RAR1_PETMA
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
 
  
 
0.777
S4RT27_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.740
IFT122
Intraflagellar transport 122.
   
 0.731
S4RCS6_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.723
S4RZK2_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.721
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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