STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RY76_PETMAPalmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). (313 aa)    
Predicted Functional Partners:
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.859
S4RKA7_PETMA
Acyl-CoA synthetase long chain family member 3b.
     
 0.852
S4RF40_PETMA
Acyl-CoA synthetase bubblegum family member 2.
     
 0.830
S4RJ96_PETMA
Mitochondrial trans-2-enoyl-CoA reductase.
    
 0.821
PISD
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
    
 0.818
S4RRH4_PETMA
Carboxymethylenebutenolidase homolog (Pseudomonas).
  
 
 0.815
PPT2-EGFL8
Uncharacterized protein.
     
0.800
S4RS58_PETMA
Uncharacterized protein.
     
0.800
S4RUG7_PETMA
Phospholipase A2, group XV.
     
 0.792
ACSL1
Acyl-CoA synthetase long chain family member 1.
     
 0.760
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.