STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RYB9_PETMARING-type domain-containing protein. (205 aa)    
Predicted Functional Partners:
DTX1
Deltex E3 ubiquitin ligase 1.
  
 
0.837
S4RJF9_PETMA
Uncharacterized protein.
    
 0.826
S4RBQ0_PETMA
Uncharacterized protein.
    
 0.690
S4RHP3_PETMA
VWFD domain-containing protein.
    
 0.690
S4RG32_PETMA
Poly [ADP-ribose] polymerase.
 
 
 
 0.688
S4RVA0_PETMA
Poly [ADP-ribose] polymerase.
 
 
 
 0.688
S4R6T2_PETMA
Uncharacterized protein.
 
 
 
 0.686
S4R8K5_PETMA
Uncharacterized protein.
 
 
 
 0.686
S4RHN1_PETMA
Zgc:175264.
    
  0.635
MSL1
MSL complex subunit 1.
    
  0.635
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.