STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RYN1_PETMAWD_REPEATS_REGION domain-containing protein. (653 aa)    
Predicted Functional Partners:
S4RD35_PETMA
Coiled-coil and C2 domain containing 2A.
    
 0.885
S4RHX2_PETMA
Uncharacterized protein.
    
 0.877
S4RM36_PETMA
Uncharacterized protein.
    
 0.860
S4RFE9_PETMA
Uncharacterized protein.
     
 0.850
S4RH51_PETMA
Uncharacterized protein.
    
 0.849
S4RHW3_PETMA
Uncharacterized protein.
    
  0.794
S4RIH3_PETMA
PDZ domain-containing protein.
    
 0.791
S4R7T9_PETMA
C2 domain-containing protein.
    
  0.784
S4RHF3_PETMA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.752
RANBP2
RAN binding protein 2.
    
 0.752
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.