STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RYP5_PETMAUncharacterized protein. (1647 aa)    
Predicted Functional Partners:
S4R825_PETMA
Myotubularin 1.
    
0.806
S4R6V6_PETMA
Uncharacterized protein.
    
 0.720
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.701
S4RMT1_PETMA
RAB21, member RAS oncogene family.
    
 0.669
S4RAR0_PETMA
Phosphatidylinositol 3-kinase, catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
     
 0.620
S4RUP9_PETMA
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.608
S4RLV0_PETMA
UDENN domain-containing protein.
 
     0.559
S4RQS7_PETMA
PHD-type domain-containing protein.
    
 
 0.531
S4RUR7_PETMA
PIP49_C domain-containing protein.
     
 0.516
S4RAI7_PETMA
Uncharacterized protein.
   
 
 0.463
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.