STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RZ70_PETMASRP receptor subunit alpha. (634 aa)    
Predicted Functional Partners:
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
0.999
S4R837_PETMA
Plug_translocon domain-containing protein.
   
 0.982
S4RCM0_PETMA
Signal recognition particle 68.
   
 0.982
S4RBS3_PETMA
Mitochondrial ribosomal protein L15.
  
 
 0.981
S4RFI6_PETMA
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.979
S4RCK2_PETMA
Signal recognition particle 19.
   
 
 0.976
S4RAQ9_PETMA
Ribosomal_L18_c domain-containing protein.
   
 
 0.973
S4RMY0_PETMA
Ribosomal protein L12.
   
 
 0.973
S4RYY5_PETMA
Ribosomal protein L11.
   
 
 0.966
S4RFB7_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.956
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (24%) [HD]