STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RZ90_PETMAAnaphase promoting complex subunit 13. (75 aa)    
Predicted Functional Partners:
S4S0U9_PETMA
Anaphase promoting complex subunit 10.
    
 0.999
S4RD56_PETMA
Cell division cycle 27.
    
 0.998
S4RXC8_PETMA
CDC23 (cell division cycle 23, yeast, homolog).
    
 0.997
S4RTM0_PETMA
Uncharacterized protein.
    
 0.996
S4RPX0_PETMA
APC1_C domain-containing protein.
    
 0.994
S4RFF5_PETMA
Anaphase promoting complex subunit 4.
    
 0.993
S4R7I3_PETMA
Fizzy/cell division cycle 20 related 1b.
    
 0.989
S4R868_PETMA
Uncharacterized protein.
    
 0.989
S4RCA4_PETMA
Cell division cycle 20 homolog.
    
 0.970
S4RPC2_PETMA
F-box domain-containing protein.
    
 
 0.942
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.