STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETFBElectron transfer flavoprotein subunit beta. (140 aa)    
Predicted Functional Partners:
S4RU64_PETMA
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.998
S4RAX4_PETMA
Acyl-CoA_dh_M domain-containing protein.
  
 0.950
S4RQJ0_PETMA
Acyl-CoA dehydrogenase medium chain.
  
 0.950
SUCLG1
Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.
  
  
 0.922
S4RTJ9_PETMA
Acyl-CoA_dh_N domain-containing protein.
  
 0.920
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
  
 
 0.916
S4R7F1_PETMA
Uncharacterized protein.
  
 0.914
S4R7V1_PETMA
Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.909
S4R6Z4_PETMA
Acyl-CoA_dh_N domain-containing protein.
  
 0.899
S4R669_PETMA
Acyl-CoA_dh_1 domain-containing protein.
  
 0.889
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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