STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RZ97_PETMAGLTSCR1 domain-containing protein. (473 aa)    
Predicted Functional Partners:
S4RN42_PETMA
Uncharacterized protein.
    
 0.802
S4RH82_PETMA
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
    
 
 0.678
S4RJQ4_PETMA
Bromo domain-containing protein.
    
 
 0.645
S4R738_PETMA
Uncharacterized protein.
    
 0.625
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.623
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
 
 0.621
S4RN62_PETMA
Actin-like 6A; Belongs to the actin family.
    
 0.612
S4RJC2_PETMA
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.563
S4RSK8_PETMA
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.559
S4RDP1_PETMA
GLE1 RNA export mediator.
    
 0.547
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.