STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RZL6_PETMAN_BRCA1_IG domain-containing protein. (242 aa)    
Predicted Functional Partners:
S4RTC7_PETMA
Uncharacterized protein.
    
 0.913
S4REM4_PETMA
Sequestosome 1.
    
 0.911
S4R625_PETMA
Uncharacterized protein.
    
 0.891
S4RGH2_PETMA
GABA(A) receptor-associated protein like 2.
    
 0.891
S4RK97_PETMA
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.891
S4RKD6_PETMA
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.891
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
 0.875
S4RMV6_PETMA
Peroxisomal biogenesis factor 5.
     
 0.809
S4RR10_PETMA
Zinc finger, AN1-type domain 4.
    
 0.583
S4RV34_PETMA
RB1-inducible coiled-coil 1.
    
 
 0.577
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.