STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RZV5_PETMAAAA_6 domain-containing protein. (408 aa)    
Predicted Functional Partners:
S4RZV4_PETMA
Uncharacterized protein.
 
     0.948
S4RYH4_PETMA
Uncharacterized protein.
 
     0.946
S4R9C8_PETMA
Uncharacterized protein.
 
     0.944
S4S021_PETMA
Uncharacterized protein.
 
     0.931
S4RSC2_PETMA
Uncharacterized protein.
 
 
  0.928
S4RTJ1_PETMA
Dynein_C domain-containing protein.
 
     0.928
S4R6A4_PETMA
Uncharacterized protein.
 
 
  0.924
S4RKH5_PETMA
Uncharacterized protein.
 
 
  0.921
S4RGX4_PETMA
Dynein_C domain-containing protein.
 
 
 
  0.905
S4RI00_PETMA
DHC_N1 domain-containing protein.
 
 
 
  0.905
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.