STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RZV6_PETMASpermine oxidase. (559 aa)    
Predicted Functional Partners:
S4RKS5_PETMA
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.898
S4RXG2_PETMA
Zgc:66484.
  
  
 
0.831
S4RHA8_PETMA
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
    
 0.824
S4RZL9_PETMA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.819
S4REM5_PETMA
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
    
  0.816
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
     
 0.816
S4RHJ6_PETMA
Amine oxidase.
     
 0.801
S4RHM3_PETMA
Amine oxidase.
     
 0.801
KDM1B
Lysine demethylase 1B.
  
  
0.698
S4R9J7_PETMA
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.683
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.