STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RZZ5_PETMASAP domain containing ribonucleoprotein. (222 aa)    
Predicted Functional Partners:
S4RXJ6_PETMA
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa.
   
 0.990
S4RJK2_PETMA
Polymerase (DNA-directed), delta interacting protein 3.
   
 0.976
S4RFN5_PETMA
Uncharacterized protein.
    
 0.925
S4RYS3_PETMA
Chromatin target of PRMT1b.
   
 0.893
S4R8F2_PETMA
THO complex 7.
   
 0.866
S4RS06_PETMA
Uncharacterized protein.
   
 0.849
S4RX76_PETMA
THO complex 5.
    
 0.825
S4RRF5_PETMA
THO complex 3.
     
 0.817
S4RX97_PETMA
Uncharacterized protein.
   
 0.807
S4RRP0_PETMA
THO complex 6.
     
 0.801
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.