STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4S018_PETMAMothers against decapentaplegic homolog. (463 aa)    
Predicted Functional Partners:
S4RK87_PETMA
E3 ubiquitin-protein ligase.
    
 0.934
S4RVK9_PETMA
SMAD family member 4a.
   
0.921
S4RYR9_PETMA
Mothers against decapentaplegic homolog.
   
0.921
S4RZ27_PETMA
MH2 domain-containing protein.
   
0.921
WWTR1
WW domain containing transcription regulator 1.
    
 0.909
S4RV88_PETMA
Mothers against decapentaplegic homolog.
    
0.894
S4R651_PETMA
Zinc finger, FYVE domain containing 9a.
    
 0.889
SMAD3
Mothers against decapentaplegic homolog.
  
 
0.883
SMAD3-2
MH1 domain-containing protein.
  
 
0.883
S4RP93_PETMA
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.882
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.