STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4S048_PETMAArfGAP with coiled-coil, ankyrin repeat and PH domains 3b. (410 aa)    
Predicted Functional Partners:
S4RMK7_PETMA
Uncharacterized protein.
 
  
 0.965
S4R7S6_PETMA
RAB35, member RAS oncogene family b.
    
 
 0.962
S4RBE0_PETMA
ADP-ribosylation factor GTPase activating protein 2.
    
0.886
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
   
0.858
S4R5R7_PETMA
Arf-GAP domain-containing protein.
    
0.828
S4R8S2_PETMA
Small ArfGAP 1.
    
0.828
S4RAV7_PETMA
Uncharacterized protein.
   
  0.804
S4RDB8_PETMA
Uncharacterized protein.
 
   
 0.804
S4RQW3_PETMA
Uncharacterized protein.
   
 
0.804
S4RG03_PETMA
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.798
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.