STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4S076_PETMACarboxypeptidase Z. (640 aa)    
Predicted Functional Partners:
S4RWF4_PETMA
Uncharacterized protein.
    
  0.981
S4RGF3_PETMA
Arrestin, beta 2a.
     
 0.624
S4RTF1_PETMA
V-SNARE coiled-coil homology domain-containing protein.
     
 0.611
S4RLW7_PETMA
Uncharacterized protein.
    
 0.565
S4RQ52_PETMA
Uncharacterized protein.
    
 0.565
S4RYK8_PETMA
LRRNT domain-containing protein.
    
 0.565
S4R4F4_PETMA
AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
  0.532
S4R7G3_PETMA
AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...]
    
  0.532
S4RET8_PETMA
Adaptor related protein complex 1 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
    
  0.532
S4RIV8_PETMA
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.532
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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