STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4S0I1_PETMAUncharacterized protein. (234 aa)    
Predicted Functional Partners:
S4RAA0_PETMA
Neurexin 3a.
 
     
0.900
S4RGE9_PETMA
Uncharacterized protein.
 
     
0.900
S4RM22_PETMA
Neurexin 2a.
 
      0.900
S4R589_PETMA
LAM_G_DOMAIN domain-containing protein.
 
      0.898
S4RRP9_PETMA
COesterase domain-containing protein.
    
 0.807
S4RYI7_PETMA
COesterase domain-containing protein.
    
 0.807
S4RBZ0_PETMA
COesterase domain-containing protein.
    
 0.715
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.685
S4RP13_PETMA
Family with sequence similarity 78 member Bb.
    
 0.667
S4RRE2_PETMA
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 0.667
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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