STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMAP00000011116annotation not available (136 aa)    
Predicted Functional Partners:
S4RM85_PETMA
ARID domain-containing protein.
    
 0.866
S4RN39_PETMA
AT rich interactive domain 4A (RBP1-like).
    
 0.866
S4RR07_PETMA
Uncharacterized protein.
   
 
 0.824
S4RP55_PETMA
Histone acetyltransferase 1.
    
 0.815
S4RR64_PETMA
Uncharacterized protein.
    
 0.801
S4R4T2_PETMA
WW domain-containing protein.
    
 0.785
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 0.783
S4R481_PETMA
K(lysine) acetyltransferase 2B.
    
 0.774
S4RLQ8_PETMA
ANK_REP_REGION domain-containing protein.
    
 0.774
S4RAY0_PETMA
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 
 0.766
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.