STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9V3A9Pectinesterase. (327 aa)    
Predicted Functional Partners:
A0A0D9V334
Uncharacterized protein.
  
 
 0.912
A0A0D9XKB0
Pectate lyase.
  
 
 0.908
A0A0D9WWQ9
Uncharacterized protein.
  
  
 0.907
A0A0D9UXD2
Uncharacterized protein.
  
  
 0.905
A0A0D9V7J7
Pectate lyase.
  
 
 0.901
A0A0D9V1V1
Pectate lyase.
  
 
 0.899
A0A0D9V8U9
Uncharacterized protein.
  
  
 0.898
A0A0D9XQW0
Uncharacterized protein.
  
  
  0.895
A0A0D9W206
Pectate lyase.
   
 
 0.877
A0A0D9X6A7
Pectate lyase.
   
 
  0.872
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.