STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9V558Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
A0A0D9WC73
HECT domain-containing protein.
     
 0.765
A0A0D9WHF7
HECT domain-containing protein.
     
 0.765
A0A0D9X9A9
Uncharacterized protein.
    
 0.664
A0A0D9WEQ5
Uncharacterized protein.
  
 
 0.596
A0A0D9WYI4
Uncharacterized protein.
  
 
 0.596
A0A0D9WYI5
Uncharacterized protein.
  
 
 0.596
A0A0D9V145
Uncharacterized protein.
     
 0.582
A0A0D9WLG7
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
     
 0.582
A0A0D9X1P9
DHQ_synthase domain-containing protein.
     
 0.582
A0A0D9XG46
DHQ_synthase domain-containing protein.
     
 0.582
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.