STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9VCS0Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
A0A0D9V5V3
Uncharacterized protein.
  
 0.977
A0A0D9XKD8
Flavokinase domain-containing protein.
  
 0.928
A0A0D9VZR2
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
   
 0.777
A0A0D9Y015
Uncharacterized protein.
  
 
 0.749
A0A0D9W6Q6
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
    
 0.744
A0A0D9UZ91
MoCF_biosynth domain-containing protein.
    
  0.730
A0A0D9VPR6
Phosphoserine aminotransferase.
  
 
 0.714
A0A0D9W473
AB hydrolase-1 domain-containing protein.
  
 
 0.714
A0A0D9X2H8
Uncharacterized protein.
   
 0.710
A0A0D9WFG3
A_deaminase domain-containing protein.
   
 0.707
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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