STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9VGP9Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
A0A0D9XC72
Uncharacterized protein.
  
     0.522
A0A0D9VKC8
Uncharacterized protein.
  
     0.506
A0A0D9VZD1
N-acetyltransferase domain-containing protein.
  
     0.505
A0A0D9W093
DUF569 domain-containing protein.
  
     0.503
A0A0D9WWF1
DUF569 domain-containing protein.
  
     0.500
A0A0D9Y1E3
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.484
A0A0D9WG77
Uncharacterized protein.
  
     0.481
A0A0D9WND1
Uncharacterized protein.
  
     0.480
A0A0D9XSK0
Uncharacterized protein.
  
     0.475
A0A0D9WB73
Uncharacterized protein.
  
     0.474
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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