STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9VTZ7Uncharacterized protein. (1113 aa)    
Predicted Functional Partners:
A0A0D9VU23
Nop domain-containing protein.
  
0.976
A0A0D9X2J0
Nop domain-containing protein.
  
0.976
A0A0D9W7V0
BP28CT domain-containing protein.
   
 0.974
A0A0D9Y1A6
WD_REPEATS_REGION domain-containing protein.
   
 0.973
A0A0D9VWR4
WD_REPEATS_REGION domain-containing protein.
   
 0.964
A0A0D9WWW2
WD_REPEATS_REGION domain-containing protein.
   
 0.963
A0A0D9VMT8
Uncharacterized protein.
   
 0.958
A0A0D9XMK6
Uncharacterized protein.
   
 0.958
A0A0D9W8U4
WD_REPEATS_REGION domain-containing protein.
   
 0.957
A0A0D9X7V6
PINc domain-containing protein.
   
 0.954
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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