STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9W3N1Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
A0A0D9XAT9
HPt domain-containing protein.
    
 0.578
A0A0D9XGY0
HPt domain-containing protein.
    
 0.504
A0A0D9V5I6
HPt domain-containing protein.
    
 0.494
A0A0D9WDJ6
HPt domain-containing protein.
    
 0.494
A0A0D9W4Z4
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.443
A0A0D9UXK8
Uncharacterized protein.
    
 0.430
A0A0D9VK22
Uncharacterized protein.
    
 0.408
A0A0D9W097
Uncharacterized protein.
    
  0.406
A0A0D9XJR0
Uncharacterized protein.
    
  0.406
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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