Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0D9UZ75 | A0A0D9VHQ4 | Sas10 domain-containing protein. | Brix domain-containing protein. | 0.851 |
A0A0D9UZ75 | A0A0D9VMB0 | Sas10 domain-containing protein. | Uncharacterized protein. | 0.722 |
A0A0D9UZ75 | A0A0D9VU24 | Sas10 domain-containing protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.877 |
A0A0D9UZ75 | A0A0D9VUL7 | Sas10 domain-containing protein. | tRNA pseudouridine synthase. | 0.760 |
A0A0D9UZ75 | A0A0D9W7H7 | Sas10 domain-containing protein. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.720 |
A0A0D9UZI0 | A0A0D9VHQ4 | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Brix domain-containing protein. | 0.440 |
A0A0D9UZI0 | A0A0D9VU24 | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.488 |
A0A0D9UZI0 | A0A0D9W7H7 | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.799 |
A0A0D9UZI0 | A0A0D9WVV9 | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | AA_TRNA_LIGASE_II domain-containing protein. | 0.997 |
A0A0D9UZI0 | A0A0D9XZ04 | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | AA_TRNA_LIGASE_II domain-containing protein. | 0.997 |
A0A0D9VDT4 | A0A0D9VHQ4 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Brix domain-containing protein. | 0.884 |
A0A0D9VDT4 | A0A0D9VMB0 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.604 |
A0A0D9VDT4 | A0A0D9VU24 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.611 |
A0A0D9VDT4 | A0A0D9W7H7 | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. | 0.753 |
A0A0D9VHQ4 | A0A0D9UZ75 | Brix domain-containing protein. | Sas10 domain-containing protein. | 0.851 |
A0A0D9VHQ4 | A0A0D9UZI0 | Brix domain-containing protein. | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.440 |
A0A0D9VHQ4 | A0A0D9VDT4 | Brix domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.884 |
A0A0D9VHQ4 | A0A0D9VMB0 | Brix domain-containing protein. | Uncharacterized protein. | 0.736 |
A0A0D9VHQ4 | A0A0D9VU24 | Brix domain-containing protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.980 |
A0A0D9VHQ4 | A0A0D9VUL7 | Brix domain-containing protein. | tRNA pseudouridine synthase. | 0.744 |
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