STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9WAD6Uncharacterized protein; Belongs to the peptidase C1 family. (464 aa)    
Predicted Functional Partners:
A0A0D9V0I1
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.964
A0A0D9WXS8
Uncharacterized protein.
    
  0.964
A0A0D9WAY6
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.963
A0A0D9WAY8
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.963
A0A0D9VSW3
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.957
A0A0D9X1Q8
OBG-type G domain-containing protein.
    
   0.957
A0A0D9X8Q0
Uncharacterized protein.
    
   0.957
A0A0D9WBF5
Uncharacterized protein.
    
  0.935
A0A0D9X420
OBG-type G domain-containing protein.
    
   0.933
A0A0D9VD99
Citrate synthase; Belongs to the citrate synthase family.
   
   0.915
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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