STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9WQS7Uncharacterized protein. (521 aa)    
Predicted Functional Partners:
A0A0D9VTF0
VQ domain-containing protein.
    
 0.639
A0A0D9WWP6
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.639
A0A0D9XSR1
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.639
A0A0D9XSR6
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.639
A0A0D9Y0F4
AMP_N domain-containing protein.
    
 0.639
A0A0D9WRP8
Uncharacterized protein.
  
  
 0.435
A0A0D9V5E3
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 
  0.428
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.