STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9WT87Uncharacterized protein. (690 aa)    
Predicted Functional Partners:
A0A0D9X9N8
Uncharacterized protein.
    
 0.989
A0A0D9V865
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.782
A0A0D9VAN6
Uncharacterized protein.
    
 
 0.782
A0A0D9V4X1
Uncharacterized protein.
    
 0.779
A0A0D9WJ38
Uncharacterized protein.
    
 0.779
A0A0D9UYJ3
Uncharacterized protein.
    
 0.773
A0A0D9WIP0
Uncharacterized protein.
    
 0.773
A0A0D9V9T1
Myb-like domain-containing protein.
    
 0.772
A0A0D9VCT0
Myb-like domain-containing protein.
    
 0.772
A0A0D9VGD8
Uncharacterized protein.
    
 0.772
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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