STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9X120FRIGIDA-like protein; Belongs to the Frigida family. (606 aa)    
Predicted Functional Partners:
A0A0D9V3Z2
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.487
A0A0D9VCT2
FLZ-type domain-containing protein.
  
     0.478
A0A0D9VZV6
TCP domain-containing protein.
  
     0.470
A0A0D9WVI7
Uncharacterized protein.
  
     0.469
A0A0D9WCI9
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.467
A0A0D9X107
Uncharacterized protein.
  
     0.465
A0A0D9VM95
Uncharacterized protein.
 
   
 0.464
A0A0D9W8Q0
FLZ-type domain-containing protein.
  
     0.461
A0A0D9X817
Uncharacterized protein.
  
  
  0.454
A0A0D9W469
BHLH domain-containing protein.
  
  
 0.452
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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