STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9X5F0Pectinesterase. (402 aa)    
Predicted Functional Partners:
A0A0D9VHU0
Uncharacterized protein.
    
 0.686
A0A0D9V480
Uncharacterized protein.
    
 0.648
A0A0D9WJH5
t-SNARE coiled-coil homology domain-containing protein.
    
 0.648
A0A0D9XJM2
Uncharacterized protein.
   
   0.633
A0A0D9XGY2
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.585
A0A0D9VMA9
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.559
A0A0D9X521
Ubiquitin-like domain-containing protein.
   
  0.552
A0A0D9X523
Ubiquitin-like domain-containing protein.
   
  0.552
A0A0D9XWF1
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
   0.549
A0A0D9VTX5
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.533
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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