STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9XMQ7Methyltransferase. (605 aa)    
Predicted Functional Partners:
A0A0D9VAI4
MACPF domain-containing protein.
  
 
  0.630
A0A0D9WVW7
MACPF domain-containing protein.
  
 
  0.629
A0A0D9XY83
Uncharacterized protein.
  
  0.626
A0A0D9Y1E3
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
  0.613
A0A0D9UVT0
NAC domain-containing protein.
  
 
  0.610
A0A0D9XDN0
NAC domain-containing protein.
  
 
  0.609
A0A0D9XF53
Uncharacterized protein.
  
 
  0.604
A0A0D9VWH8
NAC domain-containing protein.
  
 
  0.602
A0A0D9X9N3
Uncharacterized protein.
  
 
  0.601
A0A0D9VCJ7
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
  0.600
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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