STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9XWK3Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
A0A0D9VRE5
Nucleoporin_N domain-containing protein.
   
 0.963
A0A0D9WXT0
Nup54 domain-containing protein.
   
 0.957
A0A0D9VDH2
Uncharacterized protein.
   
 0.956
A0A0D9V305
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.953
A0A0D9VTZ5
Nuclear pore protein.
   
 0.953
A0A0D9XHV3
Uncharacterized protein.
   
 0.950
A0A0D9XJ96
Uncharacterized protein.
   
 0.941
A0A0D9XUM8
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.941
A0A0D9WJZ2
Uncharacterized protein.
    
 0.929
A0A0D9W971
Uncharacterized protein.
    
 0.925
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.