STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9XY71Aa_trans domain-containing protein. (445 aa)    
Predicted Functional Partners:
A0A0D9XGI5
Uncharacterized protein.
     
 0.555
A0A0D9VBX3
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.551
A0A0D9WVA6
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 
 0.551
A0A0D9W299
Uncharacterized protein.
    
 0.515
A0A0D9V7Y4
Aa_trans domain-containing protein.
  
   
 0.512
A0A0D9WH50
Aa_trans domain-containing protein.
  
   
 0.511
A0A0D9XHT0
Aa_trans domain-containing protein.
  
     0.503
A0A0D9VRT8
Aa_trans domain-containing protein.
  
     0.500
A0A0D9XPH4
Aa_trans domain-containing protein.
  
     0.498
A0A0D9V2D1
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.488
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri (A.Camus) Launert
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