STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0053Protein kinase. (788 aa)    
Predicted Functional Partners:
BISU_0237
Phosphoprotein phosphatase.
 
 0.958
BISU_1784
Signal transduction protein GarA.
 
 
 
 0.946
BISU_0239
FHA domain-containing protein.
 
 
 
 0.904
BISU_0238
Signal peptide protein.
 
 
 
 0.883
BISU_0233
Serine-threonine protein kinase.
 
 
0.714
BISU_1244
Etk-like tyrosine kinase.
    
 
 0.704
BISU_1115
Serine/threonine protein kinase.
 
  
0.668
BISU_0054
DSBA oxidoreductase.
     
 0.639
BISU_1348
Forkhead-associated protein.
   
   0.639
BISU_0236
FtsW/RodA/SpoVE family cell cycle protein; Belongs to the SEDS family.
 
 
 0.555
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.