STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0344Glucan endo-1,6-beta-glucosidase; Belongs to the glycosyl hydrolase 30 family. (634 aa)    
Predicted Functional Partners:
BISU_0092
Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1.
 
  
 0.632
argS
arginyl-tRNA ligase.
       0.539
pgl
Glucosamine-6-phosphate isomerase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
  
  0.519
BISU_0101
Alpha-galactosidase.
 
  
  0.512
BISU_2164
Hypothetical protein.
   
 
 0.506
BISU_0125
Threonine dehydratase.
     
 0.470
BISU_1611
Glycoside hydrolase 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
  
  0.442
BISU_0001
Transposase.
   
    0.426
BISU_0044
Glycosyl hydrolase family 3, N-terminal domain protein; Belongs to the glycosyl hydrolase 3 family.
 
  
  0.421
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.