STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0529L-ascorbate 6-phosphate lactonase. (358 aa)    
Predicted Functional Partners:
BISU_0531
PTS family L-ascorbate (L-asc) porter component IIC.
 
 
 0.884
BISU_0440
PTS system, IIA component.
 
  
  0.835
BISU_0530
PTS maltose transporter subunit IIABC.
 
 
  0.799
BISU_0533
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN.
 
  
  0.745
BISU_0528
6-phosphogluconate dehydrogenase.
       0.519
BISU_0442
PTS system, IIC component.
 
 
 0.504
BISU_0447
PTS system ascorbate-specific transporter subunit IIC.
 
 
 0.484
BISU_0445
PTS system ascorbate-specific transporter subunit IIA.
 
  
  0.481
BISU_1082
L-ribulose-5-phosphate 4-epimerase.
 
   
 0.479
BISU_0944
Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family.
    
  0.470
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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