STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0565Two component system histidine kinase. (886 aa)    
Predicted Functional Partners:
BISU_0576
Response regulator.
 0.955
BISU_0875
LuxR family transcriptional regulator.
 
 0.920
BISU_2130
LuxR family transcriptional regulator.
 
 0.919
BISU_1651
LuxR family transcriptional regulator.
 
 0.905
BISU_1322
LuxR family transcriptional regulator.
 
 0.860
BISU_0876
Signal transduction histidine kinase.
  
     0.755
BISU_0564
Proline iminopeptidase.
       0.654
BISU_1649
Histidine kinase sensor of two component system.
 
    0.616
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.572
BISU_1023
ABC transporter permease.
  
    0.571
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.