STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0576Response regulator. (280 aa)    
Predicted Functional Partners:
BISU_0565
Two component system histidine kinase.
 0.955
BISU_0876
Signal transduction histidine kinase.
 
 0.904
BISU_1649
Histidine kinase sensor of two component system.
 
 0.804
BISU_2130
LuxR family transcriptional regulator.
  
     0.774
BISU_1321
Histidine kinase.
 
 0.764
BISU_1322
LuxR family transcriptional regulator.
  
     0.681
BISU_0508
Membrane protein.
 
 
 0.650
BISU_1299
ATP-binding region ATPase domain protein.
 
 
 0.649
BISU_0769
ABC transporter permease.
  
 0.633
BISU_0991
Helicase.
    
  0.500
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.