STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0703ABC transporter integral membrane protein. (294 aa)    
Predicted Functional Partners:
BISU_0702
Oligopeptide/dipeptide ABC transporter ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.992
BISU_0701
Oligopeptide ABC transporter ATPase.
 
 0.980
BISU_0704
ABC transporter permease.
 
 0.980
BISU_0700
ABC transporter periplasmic protein.
 
  0.970
BISU_2063
Oligopeptide/dipeptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 0.967
BISU_2062
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.959
BISU_2059
Extracellular solute-binding protein family 5.
 0.947
BISU_2061
Peptide ABC transporter permease.
 
 0.919
BISU_1167
ABC transporter.
 
  0.914
BISU_1118
Peptide ABC transporter permease.
 
 0.909
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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