STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0740Penicillin-binding protein. (749 aa)    
Predicted Functional Partners:
BISU_0235
Penicillin-binding protein.
 
 
 0.928
BISU_2183
Peptidoglycan synthetase FtsI, penicillin-binding protein.
 
 
 0.912
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.757
BISU_2178
FtsW-like protein; Belongs to the SEDS family.
  
 
 
 0.748
BISU_0739
NADH-dependent flavin oxidoreductase BaiC.
       0.730
BISU_0741
Crp/Fnr family transcriptional regulator.
 
     0.712
BISU_0742
Ligase.
       0.639
BISU_1649
Histidine kinase sensor of two component system.
   
    0.636
BISU_0754
G5 domain-containing protein.
 
   
 0.618
BISU_0768
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
  
   
 0.578
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.