STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0781ABC transporter permease. (273 aa)    
Predicted Functional Partners:
BISU_0782
NMT1/THI5-like protein.
 
 
  0.971
BISU_0780
Sulfonate ABC transporter ATP-binding protein.
 
  0.967
BISU_0816
Aliphatic sulfonate ABC transporter substrate-binding protein.
 
 
  0.945
BISU_0480
ABC transporter ATP-binding protein.
 
  0.917
BISU_1711
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  0.916
BISU_0632
Taurine-transporting AtPase.
 
  0.915
BISU_0814
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
  0.915
BISU_0634
Family 3 extracellular solute-binding protein.
 
 
  0.894
BISU_0481
ABC transporter substrate-binding protein.
 
 
 0.859
BISU_1713
ABC transporter substrate-binding protein.
 
 
  0.772
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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