STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0833High-affinity Fe2 /Pb2 permease. (535 aa)    
Predicted Functional Partners:
BISU_0834
Amino acid ABC transporter substrate-binding protein.
 
  
 0.988
BISU_0836
ABC transporter ATP-binding protein.
 
    0.833
BISU_2120
ABC transporter, ATP binding protein, probably Coelichelin uptake porter (Iron Chelate Uptake).
   
  
 0.695
BISU_2123
ABC transporter, extracellular substrate binding protein.
   
  
 0.631
BISU_0369
Membrane protein.
  
     0.495
BISU_1715
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.471
BISU_1660
ABC transporter substrate-binding protein.
   
    0.457
BISU_2211
DivIVA protein.
  
     0.456
BISU_1558
Hypothetical protein.
  
     0.452
BISU_2453
YHS domain-containing protein.
  
    0.443
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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