STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_0908Fructose-2,6-bisphosphatase; Belongs to the phosphoglycerate mutase family. (224 aa)    
Predicted Functional Partners:
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
0.830
tal
Fis family transcriptional regulator; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.753
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
   
 
 0.747
BISU_1589
Transketolase; Belongs to the transketolase family.
    
 0.747
BISU_0249
Fructose-biphosphate aldolase.
     
 0.746
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.746
BISU_0873
Phosphoketolase.
  
 
 0.731
BISU_1159
Cystathionine beta-synthase.
   
  0.724
BISU_0907
Membrane protein.
       0.698
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.698
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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