Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BISU_0082 | BISU_0994 | BISU_0082 | BISU_0994 | Gyrb. | Cell division protein FtsJ. | 0.611 |
BISU_0082 | BISU_1225 | BISU_0082 | BISU_1225 | Gyrb. | Nicotinamidase. | 0.660 |
BISU_0082 | pheT | BISU_0082 | BISU_0979 | Gyrb. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.569 |
BISU_0082 | rpoC | BISU_0082 | BISU_0722 | Gyrb. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.764 |
BISU_0082 | rsmG | BISU_0082 | BISU_0073 | Gyrb. | 16S rRNA methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.652 |
BISU_0991 | BISU_0992 | BISU_0991 | BISU_0992 | Helicase. | Haloacid dehalogenase. | 0.842 |
BISU_0991 | BISU_0993 | BISU_0991 | BISU_0993 | Helicase. | Hypothetical protein. | 0.590 |
BISU_0991 | BISU_0994 | BISU_0991 | BISU_0994 | Helicase. | Cell division protein FtsJ. | 0.753 |
BISU_0991 | nadK | BISU_0991 | BISU_0998 | Helicase. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.603 |
BISU_0991 | tyrS | BISU_0991 | BISU_0990 | Helicase. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.640 |
BISU_0992 | BISU_0991 | BISU_0992 | BISU_0991 | Haloacid dehalogenase. | Helicase. | 0.842 |
BISU_0992 | BISU_0993 | BISU_0992 | BISU_0993 | Haloacid dehalogenase. | Hypothetical protein. | 0.737 |
BISU_0992 | BISU_0994 | BISU_0992 | BISU_0994 | Haloacid dehalogenase. | Cell division protein FtsJ. | 0.835 |
BISU_0992 | nadK | BISU_0992 | BISU_0998 | Haloacid dehalogenase. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.487 |
BISU_0992 | tyrS | BISU_0992 | BISU_0990 | Haloacid dehalogenase. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.647 |
BISU_0993 | BISU_0991 | BISU_0993 | BISU_0991 | Hypothetical protein. | Helicase. | 0.590 |
BISU_0993 | BISU_0992 | BISU_0993 | BISU_0992 | Hypothetical protein. | Haloacid dehalogenase. | 0.737 |
BISU_0993 | BISU_0994 | BISU_0993 | BISU_0994 | Hypothetical protein. | Cell division protein FtsJ. | 0.773 |
BISU_0994 | BISU_0082 | BISU_0994 | BISU_0082 | Cell division protein FtsJ. | Gyrb. | 0.611 |
BISU_0994 | BISU_0991 | BISU_0994 | BISU_0991 | Cell division protein FtsJ. | Helicase. | 0.753 |
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