Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BISU_0307 | BISU_0704 | ABC transporter substrate-binding protein. | ABC transporter permease. | 0.830 |
BISU_0307 | BISU_1118 | ABC transporter substrate-binding protein. | Peptide ABC transporter permease. | 0.886 |
BISU_0307 | BISU_1167 | ABC transporter substrate-binding protein. | ABC transporter. | 0.920 |
BISU_0307 | BISU_1168 | ABC transporter substrate-binding protein. | Peptide ABC transporter ATP-binding protein. | 0.926 |
BISU_0307 | BISU_1169 | ABC transporter substrate-binding protein. | Peptide ABC transporter permease. | 0.978 |
BISU_0307 | BISU_1170 | ABC transporter substrate-binding protein. | Glutathione transport system permease. | 0.983 |
BISU_0307 | BISU_1171 | ABC transporter substrate-binding protein. | Peptide/nickel ABC transporter substrate-binding protein. | 0.939 |
BISU_0307 | BISU_1848 | ABC transporter substrate-binding protein. | Peptide ABC transporter permease. | 0.860 |
BISU_0307 | BISU_1849 | ABC transporter substrate-binding protein. | Peptide/nickel ABC transporter permease. | 0.839 |
BISU_0307 | BISU_2061 | ABC transporter substrate-binding protein. | Peptide ABC transporter permease. | 0.916 |
BISU_0704 | BISU_0307 | ABC transporter permease. | ABC transporter substrate-binding protein. | 0.830 |
BISU_0704 | BISU_1167 | ABC transporter permease. | ABC transporter. | 0.882 |
BISU_0704 | BISU_1168 | ABC transporter permease. | Peptide ABC transporter ATP-binding protein. | 0.851 |
BISU_0704 | BISU_1169 | ABC transporter permease. | Peptide ABC transporter permease. | 0.909 |
BISU_0704 | BISU_1171 | ABC transporter permease. | Peptide/nickel ABC transporter substrate-binding protein. | 0.864 |
BISU_0704 | BISU_1849 | ABC transporter permease. | Peptide/nickel ABC transporter permease. | 0.870 |
BISU_1118 | BISU_0307 | Peptide ABC transporter permease. | ABC transporter substrate-binding protein. | 0.886 |
BISU_1118 | BISU_1167 | Peptide ABC transporter permease. | ABC transporter. | 0.861 |
BISU_1118 | BISU_1168 | Peptide ABC transporter permease. | Peptide ABC transporter ATP-binding protein. | 0.889 |
BISU_1118 | BISU_1169 | Peptide ABC transporter permease. | Peptide ABC transporter permease. | 0.961 |
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