Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BISU_0019 | BISU_0243 | Polar amino acid ABC transporter inner membrane subunit. | ABC transporter permease. | 0.456 |
BISU_0019 | BISU_0580 | Polar amino acid ABC transporter inner membrane subunit. | Amino acid ABC transporter permease. | 0.515 |
BISU_0019 | BISU_0682 | Polar amino acid ABC transporter inner membrane subunit. | Polar amino acid ABC transporter inner membrane protein. | 0.478 |
BISU_0019 | BISU_0683 | Polar amino acid ABC transporter inner membrane subunit. | Glutamine transport ATP-binding protein GlnQ. | 0.901 |
BISU_0019 | BISU_0798 | Polar amino acid ABC transporter inner membrane subunit. | Amino acid ABC transporter permease YckA1. | 0.511 |
BISU_0019 | BISU_0799 | Polar amino acid ABC transporter inner membrane subunit. | Polar amino acid ABC transporter inner membrane subunit. | 0.513 |
BISU_0019 | BISU_0843 | Polar amino acid ABC transporter inner membrane subunit. | Polar amino acid ABC transporter inner membrane subunit. | 0.454 |
BISU_0019 | BISU_1176 | Polar amino acid ABC transporter inner membrane subunit. | ABC transporter ATP-binding protein. | 0.915 |
BISU_0019 | BISU_1177 | Polar amino acid ABC transporter inner membrane subunit. | Permease protein of ABC transporter system. | 0.491 |
BISU_0019 | BISU_1179 | Polar amino acid ABC transporter inner membrane subunit. | ABC transporter substrate-binding protein. | 0.579 |
BISU_0243 | BISU_0019 | ABC transporter permease. | Polar amino acid ABC transporter inner membrane subunit. | 0.456 |
BISU_0243 | BISU_0580 | ABC transporter permease. | Amino acid ABC transporter permease. | 0.520 |
BISU_0243 | BISU_0682 | ABC transporter permease. | Polar amino acid ABC transporter inner membrane protein. | 0.484 |
BISU_0243 | BISU_0683 | ABC transporter permease. | Glutamine transport ATP-binding protein GlnQ. | 0.877 |
BISU_0243 | BISU_0798 | ABC transporter permease. | Amino acid ABC transporter permease YckA1. | 0.525 |
BISU_0243 | BISU_0799 | ABC transporter permease. | Polar amino acid ABC transporter inner membrane subunit. | 0.537 |
BISU_0243 | BISU_0843 | ABC transporter permease. | Polar amino acid ABC transporter inner membrane subunit. | 0.465 |
BISU_0243 | BISU_1176 | ABC transporter permease. | ABC transporter ATP-binding protein. | 0.897 |
BISU_0243 | BISU_1177 | ABC transporter permease. | Permease protein of ABC transporter system. | 0.499 |
BISU_0243 | BISU_1179 | ABC transporter permease. | ABC transporter substrate-binding protein. | 0.607 |
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