Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BISU_0196 | BISU_1195 | BISU_0196 | BISU_1195 | Single-stranded DNA-binding protein. | ssDNA-binding protein. | 0.899 |
BISU_0196 | BISU_1506 | BISU_0196 | BISU_1506 | Single-stranded DNA-binding protein. | Primosome assembly protein PriA. | 0.771 |
BISU_0619 | BISU_0991 | BISU_0619 | BISU_0991 | Hydrolase. | Helicase. | 0.763 |
BISU_0619 | BISU_1195 | BISU_0619 | BISU_1195 | Hydrolase. | ssDNA-binding protein. | 0.699 |
BISU_0619 | BISU_1506 | BISU_0619 | BISU_1506 | Hydrolase. | Primosome assembly protein PriA. | 0.652 |
BISU_0619 | BISU_1536 | BISU_0619 | BISU_1536 | Hydrolase. | Hypothetical protein. | 0.673 |
BISU_0619 | rbpA | BISU_0619 | BISU_1780 | Hydrolase. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.754 |
BISU_0619 | rpoZ | BISU_0619 | BISU_1503 | Hydrolase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.740 |
BISU_0991 | BISU_0619 | BISU_0991 | BISU_0619 | Helicase. | Hydrolase. | 0.763 |
BISU_0991 | BISU_1506 | BISU_0991 | BISU_1506 | Helicase. | Primosome assembly protein PriA. | 0.667 |
BISU_0991 | BISU_1536 | BISU_0991 | BISU_1536 | Helicase. | Hypothetical protein. | 0.729 |
BISU_0991 | rbpA | BISU_0991 | BISU_1780 | Helicase. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.681 |
BISU_0991 | rpoZ | BISU_0991 | BISU_1503 | Helicase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.926 |
BISU_1195 | BISU_0196 | BISU_1195 | BISU_0196 | ssDNA-binding protein. | Single-stranded DNA-binding protein. | 0.899 |
BISU_1195 | BISU_0619 | BISU_1195 | BISU_0619 | ssDNA-binding protein. | Hydrolase. | 0.699 |
BISU_1195 | BISU_1506 | BISU_1195 | BISU_1506 | ssDNA-binding protein. | Primosome assembly protein PriA. | 0.796 |
BISU_1195 | BISU_1836 | BISU_1195 | BISU_1836 | ssDNA-binding protein. | Single-stranded DNA-binding protein. | 0.777 |
BISU_1195 | rbpA | BISU_1195 | BISU_1780 | ssDNA-binding protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.726 |
BISU_1195 | rpoZ | BISU_1195 | BISU_1503 | ssDNA-binding protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.438 |
BISU_1505 | BISU_1506 | BISU_1505 | BISU_1506 | Cyclopropane-fatty-acyl-phospholipid synthase. | Primosome assembly protein PriA. | 0.654 |
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