STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_1632Mannose-6-phosphate isomerase. (466 aa)    
Predicted Functional Partners:
BISU_1667
Beta-glucosides-specific IIA component.
    
 0.974
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.906
BISU_1845
2-dehydro-3-deoxygluconokinase.
    
 0.898
BISU_1750
Allulose-6-phosphate 3-epimerase.
    
 0.798
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.777
pgi-2
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.777
BISU_0511
HAD family hydrolase.
   
 
 0.764
BISU_1791
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.738
BISU_1633
Hypothetical protein.
       0.713
BISU_0774
Acetoin dehydrogenase.
   
 
 0.677
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.