Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BISU_1663Filamentation induced by cAMP protein. (682 aa)    
Predicted Functional Partners:
BISU_1667
Beta-glucosides-specific IIA component.
  
  
 
0.929
BISU_0448
Phosphotransferase system, phosphocarrier protein HPr.
     
  0.900
BISU_1666
Transcription antiterminator.
 
     0.767
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.575
BISU_1662
Phosphotransferase.
       0.539
BISU_1745
Sugar transporter.
  
     0.439
BISU_2226
Beta-(1-2)-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
  
     0.410
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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