STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISU_1709Putative hydrolase. (452 aa)    
Predicted Functional Partners:
BISU_1708
Amidase.
       0.773
BISU_1710
Asp/Glu/hydantoin racemase.
       0.773
BISU_1706
Cytosine deaminase.
    
  0.750
BISU_1298
Putative guanine deaminase.
  
     0.748
BISU_0766
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
  0.707
BISU_1707
3-oxoacyl-(acyl-carrier-protein) reductase.
       0.689
BISU_1138
Spermine synthase.
   
  0.682
BISU_1712
ABC transporter permease.
  
    0.678
BISU_1711
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
       0.675
BISU_2260
Inosine-uridine nucleoside N-ribohydrolase.
    
 0.659
Your Current Organism:
Bifidobacterium subtile
NCBI taxonomy Id: 77635
Other names: AS 1.2267, ATCC 27537, B. subtile, BCRC 14660, CCRC 14660, CCRC:14660, CCUG 34980, DSM 20096, JCM 5822, LMG 11597, LMG:11597
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